Browse of TCMCG080C15117 protein

CDS

Accession Number	TCMCG080C15117
gbkey	CDS
Protein Id	XP_027924144.1
Location	complement(join(39091919..39092033,39092406..39092788,39093596..39093781,39094095..39094271,39094350..39094481,39094568..39094795,39095507..39095584,39095671..39095736,39095824..39095904,39096287..39097065,39097323..39097519,39097792..39097886,39099987..39100127,39100464..39100541,39100745..39100873,39101044..39101175,39101303..39101422,39101538..39101589,39103387..39103518,39103714..39103766,39103887..39103982,39104552..39104697,39105749..39105884,39107386..39107513,39108339..39108393))
Gene	LOC114181786
GeneID	114181786
Organism	Vigna unguiculata

Protein

Length	1304aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA521068
db_source	XM_028068343.1
Definition	cleavage and polyadenylation specificity factor subunit 1 isoform X4 [Vigna unguiculata]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAAAGATTTCTGTTCTCGAGTATGATGATTCTATTCATGGACTTCGAACTAGAGTGGCTTCATCTGAAAAGAGGAAGAGAACAATTTGCAAGGGGACCGGTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGTGGAGCACTTATATATGATTTGCAAATGATAATACTAAAGGCCACTCAGGCTGGTTCTGGTTTAGTTGGGGACGACGATGCCTTGGGATTTTCAGGAGCAGTTGCTGCTCGAATCGAGTCATCTTATATGATAAACCTGCGTGACTTGGATATGAGGCATGTAAAAGATTTTACGTTTGTCCATGGCTACATTGAACCTGTAATGGTTATTTTACATGAACGTGAACTCACTTGGGCTGGGCGTGTCTCATGGAAGCATCATACTTGCATGATATCAGCACTTAGTATCAGTACAACCTTAAAGCAGCATCCACTTATTTGGTCAGCTGTTAATCTCCCCCATGATGCATACAAACTTCTTGCTGTGCCCTCACCAATAGGTGGTGTTCTTGTAATAGGTGCTAACACTGTTCATTATCACAGTCAGTCTGCTTCTTGTTCATTGGCCTTGAACAGCTATGCTGTTTCACCTGACAATAGTCAAGAGATGCCGAGATCAAGTTTTAACGTGGAGCTTGATTCTGCCAATGCAACTTGGTTGTTGAGCGATGTGGCCTTGCTGTCTACAAAAACTGGCGAACTGCTATTGCTTACACTTGTTTATGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTCTGTCATCTGGTATTACGACCATTGGGAATTGTCTGTTTTTTCTCGCCAGTCGGTTAGGGGATAGTATGTTGGTGCAATTTTCTTGTGGATCTGGTGGTTCAATGTTGTCATCCAATTTAAAAGAAGAGGTTGGTGATATTGAAGTGGATGCTCCATCAAAGAGATTGCGGAGGTCACCTTCTGATACTTTGCAAGACATGGTTAGTGGTGAAGAGCTCTCCTTGTATGGGTCTGCTCCAAATAGAACAGAATCAGCTCAGAAGTCCTTCTCGTTTGCTGTGAGGGATTCATTGATTAATGTTGGTCCTTTGAAAGATTTCTCATATGGTTTAAGAATAAACGCTGATGCAAATGCTACAGGGATAGCCAAACAGAGTAACTATGAATTGGTGTGCTGTTCTGGTCATGGAAAGAATGGTTCTTTGTGTGTTCTGCGGCAATCGATTCGTCCAGAAGTGATTACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTGTATCATAAGAGCACACGCTCTCATAATACCGATTCTTCTAAGCTGGCTGATGATGATGATGAGTATCATGCCTATCTTATTATTAGTTTGGAGGCTCGTACAATGGTACTAGAAACAGCCGATCTTCTGAGTGAGGTTACTGAAAGTGTGGACTATTATGTTCAAGGAAAAACACTTGCTGCGGGAAATTTATTTGGAAGGCGTCGAGTTATCCAAGTGTATGAACGTGGTGCTCGAATTCTAGATGGTTCTTTTATGACCCAAGATGTAACCTTTGGAGCTTCAAATTCAGAATCTGGTTCTGCTTCTGAGAGTGCTGTAGCACTTTCTGTTTCTATAGCTGATCCATTTGTCTTACTCAGAATGAGTGATGGAAGTGTTCGTCTTCTGATTGGAGATCCTATTACCTGCACAATTTCTGTCACTTCACCAGCTTCATTCGAGAGCACCAAGGGATCAGTTTCTTCATGCACACTGTACCATGATAAAGGACCTGAGCCTTGGCTGAGGAAGACTAGTACTGATGCGTGGCTTTCAACTGGTGTTGGTGAGGCTATTGATGGTACTGATGGTGCTGCTCAGGACCATGGGGATATTTATTGTGTAGTTTGTTTTGATAATGGCAACCTTGAAATATTTGATGTGCCCAATTTCAATTGTGTCTTTTCTGTGGAAAATTTCATGTCTGGAAAGAGCCATCTTGTTGATGCTCTGATGAAAGAAGTACTAAAAGATTCTAAAATGGGGGATAGAGATGGAGTGGTCAGCCAAGGGAGGAAGGAAAATGTACCAGATATGAAGGTTGAAGAGTTGGCTATACAGAGATGGTCTGGGCAACATAGCCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACTATTCTTTGTTACCATGCTTATCTTTATGAAAGTCCAGATGGTACTTCTAAAGTTGAGGATTCAGCATCAGCGGGAGGATCCGTTGGCCTTGGCACTACCAATGTTTCCAGGCTTAGAAATTTGAGATTTGTTCGTGTGCCCTTGGATGCATATGCTAGGGAGGAGACATCTAATGGATCACCTCGTCAACAAATTACTATTTTTAAGAATATTGGTAATTATCAAGGATTCTTCCTGTCTGGGTCAAGACCAGCTTGGGTCATGGTGTTGAGGGAACGACTTCGTGTTCATCCACAGCTATGTGATGGGTCTATTGTTGCTTTTACTGTACTTCACAACGTGAACTGCAATCATGGACTTATATATGTTACATCACAGGGTGTTTTGAAGATATGCCAGCTGCCTTCTGGTTCAAACTATGACAGCTACTGGCCTGTACAAAAAATTCCACTAAAAGCCACTCCACACCAAGTAACATATTTTGCTGAGAAGAATTTATATCCACTTATTGTCTCGTTTCCTGTTCTTAAACCACTAAATCAAGTTATTTCTTTGGTTGACCAAGATGTCAACCATCAGAGTGAGGGTCAGAATATGAATTCTGATGAGCAAAACCGCTTTTATCCTATTGATGAATTTGAGGTTCGAATTATGGAACCAGAAAAGTCTGGTGGCCCTTGGCAAACAAAAGCAACAATACCTATGCAAAGTTCTGAAAATGCCCTCACTGTGAGGATGGTTACCCTGCTGAATACAACCTCAAAAGAAAATGAAACACTTTTAGCCATTGGGACTGCTTATGTGCAAGGAGAGGATGTTGCTGCAAGAGGACGCATCCTCCTGTTTTCTTTGGGGAAAAATACTGATAATCCACAATCTCTGGTTTCAGAGGTGTATTCTAAGGAATTAAAAGGTGCTATATCTGCCTTGGCCTCACTTCAGGGCCATCTATTAATAGCGTCTGGTCCAAAAATTATTCTGCACAAGTGGAATGGCACTGAGTTGAATGGTATTGCATTTTTTGATGCACCACCATTACATGTTGTGAGCTTAAATATTGTAAAGAACTTCATCCTTATTGGCGACATCCATAAAAGCATATACTTTCTCAGTTGGAAAGAGCAGGGTGCTCAATTGAGTTTATTAGCCAAGGATTTTGCTTCTCTCGATTGTTTTGCGACAGAATTTTTGATTGATGGAAGTACTCTTAGTCTCATGGTTTCAGATGATAAAAAAAATATCCAGATTTTTTACTATGCGCCAAAGATGTCCGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCTGAATTTCATGTTGGTGCTCATGTGACTAAATTCTTAAGATTGCAAATGCTATCCACTTCAGATAGAGCTGGTTCAGCTCCAGGCTCAGATAAAACCAATCGTTTTGCGTTATTATTTGGGACCCTGGATGGCAGTATTGGCTGCATTGCCCCGCTTGATGAAATCACATTTCGTAGACTGCAGTCTTTGCAGAGAAAGCTTGTTGATGCTGTAGCCCATGTTGCTGGCCTGAACCCCAGAGCTTTCAGACAATTTCAGTCAAATGGAAAGGCTCATAAGCCTGGCCCTGACAGTATAGTTGACTGCGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAGGAACAGCTTGAAATTGCTCATCAGGTTGGGACAACTCGATCACAAATTCTCTCAAATCTAAGTGATCTGTCTCTTGGAACAAGCTTCTTGTAA

Protein:   MQRFLFSSMMILFMDFELEWLHLKRGREQFARGPVVKVDPQGRCGGALIYDLQMIILKATQAGSGLVGDDDALGFSGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTVHYHSQSASCSLALNSYAVSPDNSQEMPRSSFNVELDSANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNCLFFLASRLGDSMLVQFSCGSGGSMLSSNLKEEVGDIEVDAPSKRLRRSPSDTLQDMVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNTDSSKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVTFGASNSESGSASESAVALSVSIADPFVLLRMSDGSVRLLIGDPITCTISVTSPASFESTKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQDHGDIYCVVCFDNGNLEIFDVPNFNCVFSVENFMSGKSHLVDALMKEVLKDSKMGDRDGVVSQGRKENVPDMKVEELAIQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDGTSKVEDSASAGGSVGLGTTNVSRLRNLRFVRVPLDAYAREETSNGSPRQQITIFKNIGNYQGFFLSGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVISLVDQDVNHQSEGQNMNSDEQNRFYPIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQGEDVAARGRILLFSLGKNTDNPQSLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFASLDCFATEFLIDGSTLSLMVSDDKKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGSAPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVAHVAGLNPRAFRQFQSNGKAHKPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDLSLGTSFL